Talks
Invited talks, seminars, conference talks and posters, most recent first.
2026
- Sept. 2026Spatial context as a statistic on the phenotypic manifold: cluster-free differential analysis of liver metastases spatial transcriptomicsBCB 2026: Bertinoro Computational Biology Meeting, Bertinoro, Italy · Invited talk
- Aug. 2026GAIN26 Science SlamGAIN26 Annual Conference (German Academic International Network), San Francisco · Co-host and moderator (invited)
- July 2026Characterizing liver metastasis from spatial sequencing dataCenter for Metastasis Research eXcellence (MET-X), Fred Hutch, Seattle · Talk
- June 2026Continuous representations and label-free differential analysis of single-cell dataCSHL Cell Modeling in Space and Time, Cold Spring Harbor · Poster and flash talk
- June 2026Bridging Research and Clinical Uses of AI at Fred HutchTDS IRC Annual Retreat, Fred Hutchinson Cancer Center, Seattle · Panelist
- Jan. 2026Computational Tissue DynamicsHHMI Janelia Research Campus, Ashburn · Talk
2025
- Nov. 2025Label-Free Differential Analysis of Single-Cell DataCSHL Single Cell Analyses, Cold Spring Harbor · Poster and flash talk
- Oct. 2025Continuous representations and label-free differential analysis of single-cell dataISSCR Seattle Symposium (International Society for Stem Cell Research), Seattle · Talk
- July 2025Comparing single-cell datasets with KompotFlorian Wimmers Group, University of Tuebingen, Germany · Seminar
- July 2025Continuous tissue representations from single-cell dataCHC Seminar, Helmholtz Munich, Germany · Invited talk
- Mar. 2025Cell-differentiation dynamics inference using cell-state-density functionsSystems Biology of Single Cells, UC Irvine · Poster
2024
- 2024Cell-differentiation dynamics inference using cell-state-density functionsBCB 2024: Bertinoro Computational Biology Meeting, Bertinoro, Italy · Invited talk
- May 2024Quantifying cell-state density with Mellonscverse Community Meeting, online · Talk
- May 2024Density landscapes of single-cell phenotypic manifoldsCenter for Metastasis Research eXcellence (MET-X), Fred Hutch, Seattle · Talk
- May 2024Quantifying cell-state density with MellonSeattle Cancer Biology Postdoctoral Symposium, Seattle · Talk
- Apr. 2024Quantifying cell-state densities with Mellon and inferring dynamicsDeep Learning Affinity Group, Fred Hutch, Seattle · Seminar
- Mar. 2024Quantifying cell-state density with MellonDana Pe'er Lab, Memorial Sloan Kettering, New York · Seminar
- Mar. 2024Quantifying cell-state densities in single-cell phenotypic landscapes using MellonCSHL Systems Biology: Global Regulation of Gene Expression, Cold Spring Harbor · Poster
2021 to 2023
- July 2023Applications of cell-state densityCenter for Metastasis Research eXcellence (MET-X), Fred Hutch, Seattle · Talk
- Mar. 2023Mellon: continuous cell-state density estimationMemorial Sloan Kettering, New York · Invited talk
- Dec. 2022Characterization of rare transitory cell states with MellonNeurIPS Workshop on Learning Meaningful Representations of Life (LMRL), virtual · Poster
- Nov. 2022Continuous cell-state density inference and applicationsMachine Learning in Computational Biology (MLCB), New Orleans · Poster
- Oct. 2022Characterization of rare transitory cell states with MellonSingle Cell Genomics (SCG), Utrecht, Netherlands · Poster
- Dec. 2021Simultaneous CUT&Tag profiling of the accessible and silenced regulome in single cellsNeurIPS Workshop on Learning Meaningful Representations of Life (LMRL), virtual · Talk
- Nov. 2021Simultaneous CUT&Tag profiling of accessible and silenced regulome in single cellsMachine Learning in Computational Biology (MLCB), virtual · Talk